Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ChoA | ChoD_1 | RMCT_4101 | RMCT_2743 | Cholesterol oxidase. | FAD dependent oxidoreductase. | 0.914 |
ChoA | ChoD_2 | RMCT_4101 | RMCT_0582 | Cholesterol oxidase. | Cholesterol oxidase precursor choD. | 0.918 |
ChoA | Cyp125 | RMCT_4101 | RMCT_1953 | Cholesterol oxidase. | Cytochrome P450. | 0.908 |
ChoA | RMCT_0297 | RMCT_4101 | RMCT_0297 | Cholesterol oxidase. | Cytochrome P450. | 0.908 |
ChoA | RMCT_1430 | RMCT_4101 | RMCT_1430 | Cholesterol oxidase. | Cholesterol dehydrogenase. | 0.908 |
ChoA | RMCT_1872 | RMCT_4101 | RMCT_1872 | Cholesterol oxidase. | Cytochrome P450 monooxygenase. | 0.908 |
ChoA | RMCT_1928 | RMCT_4101 | RMCT_1928 | Cholesterol oxidase. | Cytochrome P450. | 0.908 |
ChoD_1 | ChoA | RMCT_2743 | RMCT_4101 | FAD dependent oxidoreductase. | Cholesterol oxidase. | 0.914 |
ChoD_1 | ChoD_2 | RMCT_2743 | RMCT_0582 | FAD dependent oxidoreductase. | Cholesterol oxidase precursor choD. | 0.926 |
ChoD_1 | Cyp125 | RMCT_2743 | RMCT_1953 | FAD dependent oxidoreductase. | Cytochrome P450. | 0.909 |
ChoD_1 | RMCT_0297 | RMCT_2743 | RMCT_0297 | FAD dependent oxidoreductase. | Cytochrome P450. | 0.909 |
ChoD_1 | RMCT_1430 | RMCT_2743 | RMCT_1430 | FAD dependent oxidoreductase. | Cholesterol dehydrogenase. | 0.923 |
ChoD_1 | RMCT_1872 | RMCT_2743 | RMCT_1872 | FAD dependent oxidoreductase. | Cytochrome P450 monooxygenase. | 0.909 |
ChoD_1 | RMCT_1928 | RMCT_2743 | RMCT_1928 | FAD dependent oxidoreductase. | Cytochrome P450. | 0.909 |
ChoD_1 | RMCT_2744 | RMCT_2743 | RMCT_2744 | FAD dependent oxidoreductase. | Putative uncharacterized protein. | 0.945 |
ChoD_1 | RMCT_2745 | RMCT_2743 | RMCT_2745 | FAD dependent oxidoreductase. | Putative uncharacterized protein. | 0.773 |
ChoD_1 | RMCT_2746 | RMCT_2743 | RMCT_2746 | FAD dependent oxidoreductase. | GL26618. | 0.990 |
ChoD_2 | ChoA | RMCT_0582 | RMCT_4101 | Cholesterol oxidase precursor choD. | Cholesterol oxidase. | 0.918 |
ChoD_2 | ChoD_1 | RMCT_0582 | RMCT_2743 | Cholesterol oxidase precursor choD. | FAD dependent oxidoreductase. | 0.926 |
ChoD_2 | Cyp125 | RMCT_0582 | RMCT_1953 | Cholesterol oxidase precursor choD. | Cytochrome P450. | 0.911 |
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