Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RMCT_2748Short-chain alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (295 aa)    
Predicted Functional Partners:
RMCT_1626
Dehydrogenase.
 
 
 
 0.815
FabG_32
Short-chain dehydrogenase/reductase SDR.
 
 
 
 0.786
YcdF_2
Dehydrogenase.
 
 
 
 0.769
HdhA_1
Short chain dehydrogenase.
 
 
 
 0.746
YcdF_4
Short-chain dehydrogenase/reductase SDR.
 
 
 
 0.702
HsdA_2
3-alpha-hydroxysteroid dehydrogenase.
 
 
 
 0.688
RMCT_1651
Short-chain alcohol dehydrogenase.
 
   
 0.621
RMCT_2747
ATP-dependent transcriptional regulator.
       0.572
ChoD_1
FAD dependent oxidoreductase.
     
 0.549
PpsA_2
Beta-ketoacyl synthase.
  
 
 0.533
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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