Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RMCT_2759Integral membrane protein. (259 aa)    
Predicted Functional Partners:
RMCT_2758
Cytochrome P450 137 cyp137.
       0.538
RMCT_4221
Putative uncharacterized protein.
  
  
 0.508
PfkB_2
Ribokinase-like domain-containing protein.
  
    0.448
PfkB_1
6-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
  
    0.448
RMCT_2088
Hypothetical protein.
  
    0.444
RMCT_4549
Putative uncharacterized protein.
  
    0.427
RMCT_2757
Putative uncharacterized protein.
       0.424
RMCT_2281
TIGR03089 family protein.
 
     0.419
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
    0.411
CtpF_2
Metal cation transporter P-type ATPase ctpE.
  
    0.408
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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