DedA protein (Mycolicibacterium thermoresistibile)

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Score

DedA

Transmembrane protein. (229 aa)

Predicted Functional Partners:

RMCT_2763

0.576

topA

0.549

Stp_2

0.506

AroP

0.495

clpB

0.479

Hup

0.466

Stp_3

0.443

HslR

0.440

RMCT_0198

0.434

RMCT_4559

0.426

Your Current Organism:

Mycolicibacterium thermoresistibile

NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409

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... functional annotations:

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AroP	DedA	RMCT_2296	RMCT_2764	Cationic amino acid transporter.	Transmembrane protein.	0.495
DedA	AroP	RMCT_2764	RMCT_2296	Transmembrane protein.	Cationic amino acid transporter.	0.495
DedA	HslR	RMCT_2764	RMCT_0243	Transmembrane protein.	Ribosome-associated heat shock protein Hsp15.	0.440
DedA	Hup	RMCT_2764	RMCT_3531	Transmembrane protein.	Bacterial nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.	0.466
DedA	RMCT_0198	RMCT_2764	RMCT_0198	Transmembrane protein.	RDD domain-containing protein.	0.434
DedA	RMCT_2763	RMCT_2764	RMCT_2763	Transmembrane protein.	Hypothetical protein.	0.576
DedA	RMCT_4559	RMCT_2764	RMCT_4559	Transmembrane protein.	Stage II sporulation protein E.	0.426
DedA	Stp_2	RMCT_2764	RMCT_4282	Transmembrane protein.	Arabinose efflux permease family protein.	0.506
DedA	Stp_3	RMCT_2764	RMCT_2815	Transmembrane protein.	EmrB/QacA subfamily drug resistance transporter; Belongs to the major facilitator superfamily.	0.443
DedA	clpB	RMCT_2764	RMCT_4012	Transmembrane protein.	Endopeptidase ATP binding protein subunit B clpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.	0.479
DedA	topA	RMCT_2764	RMCT_0139	Transmembrane protein.	DNA topoisomerase I topA; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA [...]	0.549
HslR	DedA	RMCT_0243	RMCT_2764	Ribosome-associated heat shock protein Hsp15.	Transmembrane protein.	0.440
HslR	Hup	RMCT_0243	RMCT_3531	Ribosome-associated heat shock protein Hsp15.	Bacterial nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.	0.460
HslR	RMCT_0198	RMCT_0243	RMCT_0198	Ribosome-associated heat shock protein Hsp15.	RDD domain-containing protein.	0.748
HslR	clpB	RMCT_0243	RMCT_4012	Ribosome-associated heat shock protein Hsp15.	Endopeptidase ATP binding protein subunit B clpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.	0.778
Hup	DedA	RMCT_3531	RMCT_2764	Bacterial nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.	Transmembrane protein.	0.466
Hup	HslR	RMCT_3531	RMCT_0243	Bacterial nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.	Ribosome-associated heat shock protein Hsp15.	0.460
Hup	RMCT_4559	RMCT_3531	RMCT_4559	Bacterial nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.	Stage II sporulation protein E.	0.519
Hup	topA	RMCT_3531	RMCT_0139	Bacterial nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.	DNA topoisomerase I topA; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA [...]	0.639
RMCT_0198	DedA	RMCT_0198	RMCT_2764	RDD domain-containing protein.	Transmembrane protein.	0.434

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