STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KstR2_3TetR family transcriptional regulator. (216 aa)    
Predicted Functional Partners:
RMCT_3970
Phytoene dehydrogenase family protein.
 
   
 0.728
RMCT_3980
Putative uncharacterized protein.
 
   
 0.679
AntB
Beta subunit of hydroxylase component of benzoate 1,2-dioxygenase.
  
     0.657
CbdA
Dioxygenase large subunit.
 
   
 0.633
BdhA_1
Bacilysin biosynthesis oxidoreductase bacC.
 
   
 0.570
RMCT_3136
Transcriptional regulatory protein.
  
    0.452
RMCT_2774
Protein of unknown function.
       0.429
RMCT_2775
Putative uncharacterized protein.
       0.429
RMCT_2776
Putative uncharacterized protein.
       0.429
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
  
    0.424
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.