Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CaiD_10 | FadJ | RMCT_1926 | RMCT_1791 | enoyl-CoA hydratase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.809 |
CaiD_10 | RMCT_2786 | RMCT_1926 | RMCT_2786 | enoyl-CoA hydratase. | acyl-CoA dehydrogenase. | 0.703 |
CaiD_10 | RMCT_4172 | RMCT_1926 | RMCT_4172 | enoyl-CoA hydratase. | P40 protein. | 0.623 |
CaiD_10 | RMCT_4709 | RMCT_1926 | RMCT_4709 | enoyl-CoA hydratase. | acyl-CoA dehydrogenase. | 0.703 |
CaiD_7 | FadJ | RMCT_4184 | RMCT_1791 | carnitinyl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 3-hydroxyacyl-CoA dehydrogenase. | 0.478 |
CaiD_7 | RMCT_2786 | RMCT_4184 | RMCT_2786 | carnitinyl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | acyl-CoA dehydrogenase. | 0.704 |
CaiD_7 | RMCT_4172 | RMCT_4184 | RMCT_4172 | carnitinyl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | P40 protein. | 0.623 |
CaiD_7 | RMCT_4709 | RMCT_4184 | RMCT_4709 | carnitinyl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | acyl-CoA dehydrogenase. | 0.704 |
EchA1_1 | FadJ | RMCT_4158 | RMCT_1791 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 3-hydroxyacyl-CoA dehydrogenase. | 0.809 |
EchA1_1 | RMCT_2786 | RMCT_4158 | RMCT_2786 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | acyl-CoA dehydrogenase. | 0.704 |
EchA1_1 | RMCT_4172 | RMCT_4158 | RMCT_4172 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | P40 protein. | 0.623 |
EchA1_1 | RMCT_4709 | RMCT_4158 | RMCT_4709 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | acyl-CoA dehydrogenase. | 0.704 |
EchA8_24 | EchA8_25 | RMCT_1483 | RMCT_1484 | enoyl-CoA hydratase echA9. | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.947 |
EchA8_24 | FadJ | RMCT_1483 | RMCT_1791 | enoyl-CoA hydratase echA9. | 3-hydroxyacyl-CoA dehydrogenase. | 0.833 |
EchA8_24 | RMCT_0916 | RMCT_1483 | RMCT_0916 | enoyl-CoA hydratase echA9. | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.591 |
EchA8_24 | RMCT_2468 | RMCT_1483 | RMCT_2468 | enoyl-CoA hydratase echA9. | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.596 |
EchA8_24 | RMCT_2786 | RMCT_1483 | RMCT_2786 | enoyl-CoA hydratase echA9. | acyl-CoA dehydrogenase. | 0.703 |
EchA8_24 | RMCT_4172 | RMCT_1483 | RMCT_4172 | enoyl-CoA hydratase echA9. | P40 protein. | 0.623 |
EchA8_24 | RMCT_4709 | RMCT_1483 | RMCT_4709 | enoyl-CoA hydratase echA9. | acyl-CoA dehydrogenase. | 0.703 |
EchA8_25 | EchA8_24 | RMCT_1484 | RMCT_1483 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | enoyl-CoA hydratase echA9. | 0.947 |
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