STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_2817Hypothetical protein. (267 aa)    
Predicted Functional Partners:
AccA1_1
Urea amidolyase.
  
  
 0.960
Stp_3
EmrB/QacA subfamily drug resistance transporter; Belongs to the major facilitator superfamily.
  
    0.661
KipI
Allophanate hydrolase subunit 1.
  
  
 0.640
pxpA
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
      0.624
RMCT_4109
Urea amidolyase related protein.
  
  
 0.607
Kgd
Alpha-ketoglutarate decarboxylase.
       0.596
RMCT_2820
Short-chain type dehydrogenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.595
RMCT_0739
Membrane protein.
  
     0.568
Bcr
Bcr/CflA subfamily drug resistance transporter.
  
    0.540
RMCT_1477
Integral membrane protein.
 
     0.491
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.