Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RMCT_2820Short-chain type dehydrogenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (274 aa)    
Predicted Functional Partners:
EthA_3
Monooxygenase EthA.
 
  
 0.679
EthA_2
Monooxygenase.
 
  
 0.661
LgrD_2
Linear gramicidin synthetase subunit D.
 
  
 0.616
RMCT_4707
Linear gramicidin synthetase subunit D.
 
  
 0.593
RMCT_3052
acyl-CoA dehydrogenase.
 
  
 0.574
FabG_14
Glucose 1-dehydrogenase.
 
  
 0.563
YcdF_2
Dehydrogenase.
 
  
 0.563
HapE_5
Monooxygenase.
 
  
 0.555
HapE_6
Cyclohexanone monooxygenase.
 
  
 0.523
YcdF_4
Short-chain dehydrogenase/reductase SDR.
 
  
 0.519
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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