STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UgpC_2Sugar-transport ATP-binding protein ABC transporter sugC; Belongs to the ABC transporter superfamily. (395 aa)    
Predicted Functional Partners:
YcjP_2
Sugar-transport integral membrane protein ABC transporter sugB.
 
 0.999
YcjO_2
Sugar-transport integral membrane protein ABC transporter sugA.
 
 
 0.999
LpqY
Lipoprotein (sugar-binding) lpqY.
 
 
 0.999
YcjP_1
Sugar ABC transporter permease.
 
 0.995
YcjO_1
Sugar ABC transporter permease.
 
 0.994
RMCT_2446
Sugar ABC transporter periplasmic protein.
 
 0.975
UgpC_1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  
 
0.905
RMCT_2823
Suppressor of fused protein.
       0.883
RMCT_2828
Transmembrane protein.
       0.799
MetN2
ABC transporter-like protein.
   
0.679
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.