Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
YcjO_2Sugar-transport integral membrane protein ABC transporter sugA. (310 aa)    
Predicted Functional Partners:
UgpC_2
Sugar-transport ATP-binding protein ABC transporter sugC; Belongs to the ABC transporter superfamily.
 
 
 0.999
YcjP_2
Sugar-transport integral membrane protein ABC transporter sugB.
 
 0.999
LpqY
Lipoprotein (sugar-binding) lpqY.
 0.999
UgpC_1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.991
YcjP_1
Sugar ABC transporter permease.
 
 
 0.985
RMCT_2446
Sugar ABC transporter periplasmic protein.
 
 
 0.967
RMCT_2823
Suppressor of fused protein.
       0.852
RMCT_2828
Transmembrane protein.
       0.785
RMCT_2821
Glycine betaine ABC transporter substrate-binding protein.
     
 0.564
MalL
Alpha-glucosidase aglA.
 
  
 0.561
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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