Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_2828Transmembrane protein. (172 aa)    
Predicted Functional Partners:
RMCT_2821
Glycine betaine ABC transporter substrate-binding protein.
 
    0.865
YcjO_2
Sugar-transport integral membrane protein ABC transporter sugA.
       0.785
LpqY
Lipoprotein (sugar-binding) lpqY.
       0.785
YcjP_2
Sugar-transport integral membrane protein ABC transporter sugB.
       0.775
UgpC_2
Sugar-transport ATP-binding protein ABC transporter sugC; Belongs to the ABC transporter superfamily.
       0.773
RMCT_2823
Suppressor of fused protein.
       0.686
RMCT_2829
Putative uncharacterized protein.
       0.561
RMCT_1782
DNA-binding protein.
 
    0.557
RMCT_0290
Anti-sigma regulatory factor.
 
  
 0.533
RMCT_4469
Hypothetical protein.
  
     0.529
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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