Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DrrA_3ABC transporter ATP-binding protein. (305 aa)    
Predicted Functional Partners:
RMCT_2842
ABC transporter.
 
 
 0.999
RMCT_2840
Transcriptional regulator.
 
   
 0.915
RMCT_2843
Conserved integral membrane protein.
  
  
 0.816
RMCT_1389
Drug ABC transporter ATP-binding protein.
 
 0.724
LivF_1
Branched-chain amino acid ABC transporter ATPase.
     
0.697
ProV
Osmoprotectant transport system ATP-binding protein.
    
0.694
RMCT_1747
ABC transporter-like protein.
 
 0.685
IrtA
Drug ABC transporter ATP-binding protein.
  
 0.642
YheH
ABC transporter.
  
 0.641
RMCT_1746
ABC transporter.
  
 0.641
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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