RMCT_2873 protein (Mycolicibacterium thermoresistibile)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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[Homology]

Score

RMCT_2873

Transposition helper protein. (285 aa)

Predicted Functional Partners:

RMCT_2874

0.966

RMCT_4712

0.858

RMCT_4713

0.857

DnaB

0.803

DnaA_4

0.773

DnaA_3

0.772

RMCT_4697

0.741

RMCT_4684

0.452

RMCT_2875

0.432

DpnA

0.429

Your Current Organism:

Mycolicibacterium thermoresistibile

NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DnaA_3	DnaB	RMCT_4586	RMCT_1159	IstB domain-containing protein ATP-binding protein.	Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.	0.803
DnaA_3	RMCT_2873	RMCT_4586	RMCT_2873	IstB domain-containing protein ATP-binding protein.	Transposition helper protein.	0.772
DnaA_3	RMCT_2874	RMCT_4586	RMCT_2874	IstB domain-containing protein ATP-binding protein.	Transposase for insertion sequence element IS5376.	0.855
DnaA_3	RMCT_4697	RMCT_4586	RMCT_4697	IstB domain-containing protein ATP-binding protein.	Transposase.	0.798
DnaA_3	RMCT_4712	RMCT_4586	RMCT_4712	IstB domain-containing protein ATP-binding protein.	Transposase.	0.857
DnaA_3	RMCT_4713	RMCT_4586	RMCT_4713	IstB domain-containing protein ATP-binding protein.	Transposase.	0.856
DnaA_4	DnaB	RMCT_4592	RMCT_1159	IstB domain-containing protein ATP-binding protein.	Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.	0.803
DnaA_4	RMCT_2873	RMCT_4592	RMCT_2873	IstB domain-containing protein ATP-binding protein.	Transposition helper protein.	0.773
DnaA_4	RMCT_2874	RMCT_4592	RMCT_2874	IstB domain-containing protein ATP-binding protein.	Transposase for insertion sequence element IS5376.	0.857
DnaA_4	RMCT_4697	RMCT_4592	RMCT_4697	IstB domain-containing protein ATP-binding protein.	Transposase.	0.797
DnaA_4	RMCT_4712	RMCT_4592	RMCT_4712	IstB domain-containing protein ATP-binding protein.	Transposase.	0.857
DnaA_4	RMCT_4713	RMCT_4592	RMCT_4713	IstB domain-containing protein ATP-binding protein.	Transposase.	0.856
DnaB	DnaA_3	RMCT_1159	RMCT_4586	Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.	IstB domain-containing protein ATP-binding protein.	0.803
DnaB	DnaA_4	RMCT_1159	RMCT_4592	Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.	IstB domain-containing protein ATP-binding protein.	0.803
DnaB	RMCT_2873	RMCT_1159	RMCT_2873	Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.	Transposition helper protein.	0.803
DpnA	RMCT_2873	RMCT_2876	RMCT_2873	DNA methylase N-4/N-6 domain-containing protein.	Transposition helper protein.	0.429
DpnA	RMCT_2874	RMCT_2876	RMCT_2874	DNA methylase N-4/N-6 domain-containing protein.	Transposase for insertion sequence element IS5376.	0.402
DpnA	RMCT_2875	RMCT_2876	RMCT_2875	DNA methylase N-4/N-6 domain-containing protein.	DNA/RNA helicase.	0.956
RMCT_2873	DnaA_3	RMCT_2873	RMCT_4586	Transposition helper protein.	IstB domain-containing protein ATP-binding protein.	0.772
RMCT_2873	DnaA_4	RMCT_2873	RMCT_4592	Transposition helper protein.	IstB domain-containing protein ATP-binding protein.	0.773

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