STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_2880Transposase, IS4 family protein. (190 aa)    
Predicted Functional Partners:
RMCT_1401
Transposase, IS4 family.
  
     0.742
TagH
O-antigen/lipopolysaccharide transport ATP-binding protein ABC transporter rfbE.
  
  
 0.611
RfbD
O-antigen/lipopolysaccharide transport integral membrane protein ABC transporter rfbD.
  
  
 0.609
RMCT_3970
Phytoene dehydrogenase family protein.
  
   
 0.609
Mrp
ATP-binding Mrp protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.544
RMCT_4622
Transposase for insertion sequence element.
 
     0.487
RMCT_2519
Putative uncharacterized protein.
  
     0.473
GlfT1
L-rhamnosyltransferase.
  
  
 0.459
WbbL
dTDP-RHA:A-D-GlcNAc-diphosphoryl polyprenol-A-3-L-rhamnosyl transferase wbbL1.
  
  
 0.459
RMCT_3466
Transferase.
  
  
 0.459
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.