Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_2889acyl-CoA dehydrogenase. (382 aa)    
Predicted Functional Partners:
Lvr_4
Short chain dehydrogenase.
 
  0.997
RMCT_2893
acyl-CoA dehydrogenase fadE33.
 
 0.997
RMCT_2378
Acyl dehydratase.
 
 0.960
RMCT_2892
acyl-CoA dehydrogenase fadE32.
 
  
 0.960
RMCT_3378
enoyl-CoA hydratase.
 
 0.960
RMCT_3973
Acyl dehydratase.
  
 0.954
PcaF_5
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.920
KstR2_11
TetR family transcriptional regulator.
 
   
 0.911
CaiD_11
enoyl-CoA hydratase.
 
 0.910
GctB
CoA-transferase subunit beta.
 
 
 0.889
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.