STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_2892acyl-CoA dehydrogenase fadE32. (326 aa)    
Predicted Functional Partners:
CaiA_8
acyl-CoA dehydrogenase.
  
 0.994
RMCT_2893
acyl-CoA dehydrogenase fadE33.
 
  
0.982
Lvr_4
Short chain dehydrogenase.
 
 0.968
RMCT_2889
acyl-CoA dehydrogenase.
  
 0.968
CaiD_11
enoyl-CoA hydratase.
 
 0.960
AspC_2
Aspartate aminotransferase.
  
  
 0.950
GctA
CoA-transferase subunit alpha.
 
  
 0.856
FadD_18
acyl-CoA synthetase.
 
  
 0.844
RMCT_1951
acyl-CoA dehydrogenase fadE29.
  
   
 0.835
EchA8_24
enoyl-CoA hydratase echA9.
  
 0.827
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.