Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BdhA_43-hydroxybutyrate dehydrogenase. (248 aa)    
Predicted Functional Partners:
YngG_2
hydroxymethylglutaryl-CoA lyase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.934
YngG_1
hydroxymethylglutaryl-CoA lyase.
  
 
 0.934
AcsA_2
acetoacetyl-CoA synthetase.
    
 0.914
AcsA_1
acetoacetyl-CoA synthetase.
    
 0.914
YhjE_3
General substrate transporter.
 
   
 0.861
HsaD_3
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase bphD.
  
 0.735
HsaA_5
Oxidoreductase.
  
  0.717
KasA_2
Fatty acid synthase.
  
 0.707
HsaC
Biphenyl-2,3-diol-1,2-dioxygenase bphC.
  
 
 0.673
HsaB_2
Oxidoreductase.
     
 0.604
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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