Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RMCT_0183 | RMCT_1387 | RMCT_0183 | RMCT_1387 | Putative uncharacterized protein. | Lipoprotein lprB. | 0.756 |
RMCT_0183 | RMCT_2919 | RMCT_0183 | RMCT_2919 | Putative uncharacterized protein. | Putative uncharacterized protein. | 0.721 |
RMCT_0183 | RMCT_3485 | RMCT_0183 | RMCT_3485 | Putative uncharacterized protein. | Hypothetical protein. | 0.546 |
RMCT_0183 | RMCT_3730 | RMCT_0183 | RMCT_3730 | Putative uncharacterized protein. | Extracellular solute-binding protein. | 0.593 |
RMCT_1140 | RMCT_2268 | RMCT_1140 | RMCT_2268 | Putative uncharacterized protein. | Putative uncharacterized protein. | 0.544 |
RMCT_1140 | RMCT_2919 | RMCT_1140 | RMCT_2919 | Putative uncharacterized protein. | Putative uncharacterized protein. | 0.749 |
RMCT_1140 | RMCT_3485 | RMCT_1140 | RMCT_3485 | Putative uncharacterized protein. | Hypothetical protein. | 0.488 |
RMCT_1387 | RMCT_0183 | RMCT_1387 | RMCT_0183 | Lipoprotein lprB. | Putative uncharacterized protein. | 0.756 |
RMCT_1387 | RMCT_2919 | RMCT_1387 | RMCT_2919 | Lipoprotein lprB. | Putative uncharacterized protein. | 0.944 |
RMCT_1387 | RMCT_3485 | RMCT_1387 | RMCT_3485 | Lipoprotein lprB. | Hypothetical protein. | 0.683 |
RMCT_1387 | RMCT_3730 | RMCT_1387 | RMCT_3730 | Lipoprotein lprB. | Extracellular solute-binding protein. | 0.777 |
RMCT_1387 | rplS | RMCT_1387 | RMCT_4217 | Lipoprotein lprB. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.864 |
RMCT_1387 | rpmB | RMCT_1387 | RMCT_3520 | Lipoprotein lprB. | 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.799 |
RMCT_2268 | RMCT_1140 | RMCT_2268 | RMCT_1140 | Putative uncharacterized protein. | Putative uncharacterized protein. | 0.544 |
RMCT_2268 | RMCT_2919 | RMCT_2268 | RMCT_2919 | Putative uncharacterized protein. | Putative uncharacterized protein. | 0.710 |
RMCT_2268 | RMCT_3477 | RMCT_2268 | RMCT_3477 | Putative uncharacterized protein. | Copper resistance D domain-containing protein. | 0.642 |
RMCT_2918 | RMCT_2919 | RMCT_2918 | RMCT_2919 | Putative uncharacterized protein. | Putative uncharacterized protein. | 0.785 |
RMCT_2918 | rplS | RMCT_2918 | RMCT_4217 | Putative uncharacterized protein. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.750 |
RMCT_2918 | rpmB | RMCT_2918 | RMCT_3520 | Putative uncharacterized protein. | 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.634 |
RMCT_2919 | RMCT_0183 | RMCT_2919 | RMCT_0183 | Putative uncharacterized protein. | Putative uncharacterized protein. | 0.721 |
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