Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ArsC_2 | CymR | RMCT_1533 | RMCT_1370 | Arsenate reductase; Belongs to the ArsC family. | BadM/Rrf2 family transcriptional regulator. | 0.480 |
ArsC_2 | NsrR | RMCT_1533 | RMCT_2960 | Arsenate reductase; Belongs to the ArsC family. | BadM/Rrf2 family transcriptional regulator. | 0.547 |
BaeB_1 | Hmp_1 | RMCT_2961 | RMCT_2959 | Glyoxalase II. | Hemoglobin-like flavoprotein; Belongs to the globin family. | 0.588 |
BaeB_1 | NsrR | RMCT_2961 | RMCT_2960 | Glyoxalase II. | BadM/Rrf2 family transcriptional regulator. | 0.590 |
CymR | ArsC_2 | RMCT_1370 | RMCT_1533 | BadM/Rrf2 family transcriptional regulator. | Arsenate reductase; Belongs to the ArsC family. | 0.480 |
CymR | CzcD | RMCT_1370 | RMCT_2761 | BadM/Rrf2 family transcriptional regulator. | Cation diffusion facilitator family transporter. | 0.525 |
CymR | IscS | RMCT_1370 | RMCT_3575 | BadM/Rrf2 family transcriptional regulator. | Cysteine desulfurase iscS. | 0.748 |
CymR | NfuA | RMCT_1370 | RMCT_1081 | BadM/Rrf2 family transcriptional regulator. | Rieske (2Fe-2S) protein. | 0.485 |
CymR | NifU | RMCT_1370 | RMCT_3161 | BadM/Rrf2 family transcriptional regulator. | Nitrogen fixation-like protein. | 0.560 |
CymR | NsrR | RMCT_1370 | RMCT_2960 | BadM/Rrf2 family transcriptional regulator. | BadM/Rrf2 family transcriptional regulator. | 0.639 |
CymR | RMCT_0723 | RMCT_1370 | RMCT_0723 | BadM/Rrf2 family transcriptional regulator. | Thioredoxin-like protein. | 0.485 |
CymR | YjiA | RMCT_1370 | RMCT_1501 | BadM/Rrf2 family transcriptional regulator. | GTPase, G3E family. | 0.525 |
CzcD | CymR | RMCT_2761 | RMCT_1370 | Cation diffusion facilitator family transporter. | BadM/Rrf2 family transcriptional regulator. | 0.525 |
CzcD | NsrR | RMCT_2761 | RMCT_2960 | Cation diffusion facilitator family transporter. | BadM/Rrf2 family transcriptional regulator. | 0.525 |
CzcD | YjiA | RMCT_2761 | RMCT_1501 | Cation diffusion facilitator family transporter. | GTPase, G3E family. | 0.572 |
Hmp_1 | BaeB_1 | RMCT_2959 | RMCT_2961 | Hemoglobin-like flavoprotein; Belongs to the globin family. | Glyoxalase II. | 0.588 |
Hmp_1 | NfuA | RMCT_2959 | RMCT_1081 | Hemoglobin-like flavoprotein; Belongs to the globin family. | Rieske (2Fe-2S) protein. | 0.418 |
Hmp_1 | NsrR | RMCT_2959 | RMCT_2960 | Hemoglobin-like flavoprotein; Belongs to the globin family. | BadM/Rrf2 family transcriptional regulator. | 0.960 |
Hmp_1 | RMCT_0723 | RMCT_2959 | RMCT_0723 | Hemoglobin-like flavoprotein; Belongs to the globin family. | Thioredoxin-like protein. | 0.418 |
IscS | CymR | RMCT_3575 | RMCT_1370 | Cysteine desulfurase iscS. | BadM/Rrf2 family transcriptional regulator. | 0.748 |
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