Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
NsrRBadM/Rrf2 family transcriptional regulator. (152 aa)    
Predicted Functional Partners:
Hmp_1
Hemoglobin-like flavoprotein; Belongs to the globin family.
 
   
 0.960
IscS
Cysteine desulfurase iscS.
  
  
 0.764
BaeB_1
Glyoxalase II.
     
 0.584
CymR
BadM/Rrf2 family transcriptional regulator.
     
 0.563
NifU
Nitrogen fixation-like protein.
  
  
 0.556
ArsC_2
Arsenate reductase; Belongs to the ArsC family.
 
  
 0.550
RMCT_3863
Iron-sulfur cluster biosynthesis protein; Belongs to the HesB/IscA family.
  
  
 0.488
RMCT_0723
Thioredoxin-like protein.
  
  
 0.471
NfuA
Rieske (2Fe-2S) protein.
  
  
 0.471
Hmp_6
Hemoglobine-related protein hmp.
 
  
 0.443
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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