STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_2977Transmembrane protein. (232 aa)    
Predicted Functional Partners:
RMCT_2976
Carbohydrate-binding protein.
  
    0.692
RMCT_2978
Exported protein.
       0.602
RMCT_0078
Methylase.
 
     0.589
EccE1
Predicted protein.
  
     0.582
EccD1
Transmembrane protein.
  
     0.570
RMCT_2466
Putative uncharacterized protein.
  
     0.534
EccB1_1
Type VII secretion protein EccB, Actinobacterial.
 
     0.526
RMCT_3038
Ketosteroid isomerase-like protein.
 
     0.519
EspG1_1
ESX-1 secretion-associated protein EspG1.
  
     0.494
RMCT_0290
Anti-sigma regulatory factor.
 
     0.480
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.