Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RMCT_3019Integrase. (445 aa)    
Predicted Functional Partners:
RMCT_3018
Conserved protein of unknown function.
 
     0.760
RMCT_1215
Protein of unknown function DUF222/HNH endonuclease.
 
  
 0.532
RMCT_2713
Conserved protein of unknown function.
 
  
 0.522
RMCT_3016
Oxpp cycle protein opcA.
       0.510
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
       0.510
RMCT_3022
Transposase IS6110.
 
   
 0.504
RMCT_0200
Zn-dependent hydrolase.
  
  
 0.495
RMCT_0342
Integral membrane protein.
  
    0.479
RMCT_4179
Membrane protein.
  
    0.475
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
 
    0.473
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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