STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_3038Ketosteroid isomerase-like protein. (148 aa)    
Predicted Functional Partners:
RMCT_3040
acyl-CoA dehydrogenase.
 
     0.829
RMCT_3039
Aminoglycoside phosphotransferase.
       0.799
RMCT_3695
Putative uncharacterized protein.
 
   
 0.722
RMCT_3044
Alpha/beta hydrolase fold protein.
 
    0.720
RMCT_3163
Putative uncharacterized protein.
 
     0.717
RMCT_2407
Phenylacetic acid degradation-like protein.
 
     0.679
RMCT_0194
Aminoglycoside phosphotransferase.
  
     0.671
EthR_2
TetR family transcriptional regulator.
       0.662
YngG_1
hydroxymethylglutaryl-CoA lyase.
       0.662
RMCT_0078
Methylase.
 
     0.647
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.