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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EthR_2TetR family transcriptional regulator. (203 aa)    
Predicted Functional Partners:
YngG_1
hydroxymethylglutaryl-CoA lyase.
     
 0.886
RMCT_3044
Alpha/beta hydrolase fold protein.
 
   
 0.875
RMCT_3045
Homogentisate 1,2-dioxygenase.
 
     0.871
RMCT_3039
Aminoglycoside phosphotransferase.
       0.805
RMCT_3040
acyl-CoA dehydrogenase.
       0.805
Frc_5
formyl-CoA transferase; Belongs to the CoA-transferase III family.
  
    0.801
RMCT_3037
Response regulator.
  
  
 0.766
IdeR_1
Transcriptional repressor sirR.
  
  
 0.739
cobB-2
NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily.
  
  
 0.737
CysL
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
 
 0.734
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.