Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
PimEMannosyltransferase. (413 aa)    
Predicted Functional Partners:
RMCT_3315
Conserved alanine, arginine and proline rich membrane protein.
  
    0.776
RMCT_1665
Integral membrane protein.
  
     0.756
RMCT_1153
Transmembrane protein.
 
   
 0.735
RMCT_4131
Transmembrane protein.
 
  
 0.703
PimB
Glycoside hydrolase family protein.
  
  
 0.700
MgtA
Mannosyltransferase pimB.
  
  
 0.695
RMCT_0772
lysine-N-oxygenase mbtG.
  
     0.666
RMCT_3075
Conserved alanine and proline rich protein.
 
   
 0.628
RMCT_0342
Integral membrane protein.
 
     0.619
RMCT_1838
Abortive infection protein.
 
     0.616
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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