STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_3136Transcriptional regulatory protein. (209 aa)    
Predicted Functional Partners:
dinB-2
DNA-directed DNA polymerase; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
     
 0.911
Azr
NADPH-dependent FMN reductase.
 
   
 0.870
YybR
HxlR family transcriptional regulator.
 
  
 0.823
RMCT_0513
Transcriptional regulator.
 
  
 0.816
CysL
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
 
 0.809
RMCT_3099
Transcriptional regulator.
  
  
 0.773
EthR_1
Transcriptional regulator.
  
  
 0.768
GerE
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
  
 0.758
RMCT_3138
Na+/H+ antiporter.
       0.751
RMCT_2435
TetR family transcriptional regulator.
  
    0.750
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.