Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DegP | DegQ | RMCT_2836 | RMCT_1580 | Trypsin-like serine protease with C-terminal PDZ domain. | Trypsin-like serine protease with C-terminal PDZ domain. | 0.523 |
| DegP | RMCT_3142 | RMCT_2836 | RMCT_3142 | Trypsin-like serine protease with C-terminal PDZ domain. | Putative uncharacterized protein. | 0.562 |
| DegP | YfcA_1 | RMCT_2836 | RMCT_3143 | Trypsin-like serine protease with C-terminal PDZ domain. | Transporter. | 0.417 |
| DegQ | DegP | RMCT_1580 | RMCT_2836 | Trypsin-like serine protease with C-terminal PDZ domain. | Trypsin-like serine protease with C-terminal PDZ domain. | 0.523 |
| DegQ | HhoB_1 | RMCT_1580 | RMCT_1683 | Trypsin-like serine protease with C-terminal PDZ domain. | Peptidase S1 and S6, chymotrypsin/Hap. | 0.537 |
| DegQ | RMCT_3142 | RMCT_1580 | RMCT_3142 | Trypsin-like serine protease with C-terminal PDZ domain. | Putative uncharacterized protein. | 0.633 |
| DegQ | YfcA_1 | RMCT_1580 | RMCT_3143 | Trypsin-like serine protease with C-terminal PDZ domain. | Transporter. | 0.417 |
| HhoB_1 | DegQ | RMCT_1683 | RMCT_1580 | Peptidase S1 and S6, chymotrypsin/Hap. | Trypsin-like serine protease with C-terminal PDZ domain. | 0.537 |
| HhoB_1 | HhoB_2 | RMCT_1683 | RMCT_0045 | Peptidase S1 and S6, chymotrypsin/Hap. | Trypsin-like serine protease with C-terminal PDZ domain. | 0.928 |
| HhoB_1 | RMCT_3142 | RMCT_1683 | RMCT_3142 | Peptidase S1 and S6, chymotrypsin/Hap. | Putative uncharacterized protein. | 0.562 |
| HhoB_1 | YfcA_1 | RMCT_1683 | RMCT_3143 | Peptidase S1 and S6, chymotrypsin/Hap. | Transporter. | 0.417 |
| HhoB_2 | HhoB_1 | RMCT_0045 | RMCT_1683 | Trypsin-like serine protease with C-terminal PDZ domain. | Peptidase S1 and S6, chymotrypsin/Hap. | 0.928 |
| HhoB_2 | RMCT_3142 | RMCT_0045 | RMCT_3142 | Trypsin-like serine protease with C-terminal PDZ domain. | Putative uncharacterized protein. | 0.562 |
| HhoB_2 | YfcA_1 | RMCT_0045 | RMCT_3143 | Trypsin-like serine protease with C-terminal PDZ domain. | Transporter. | 0.417 |
| RMCT_0109 | RMCT_3142 | RMCT_0109 | RMCT_3142 | Membrane-associated serine protease. | Putative uncharacterized protein. | 0.547 |
| RMCT_0109 | YfcA_1 | RMCT_0109 | RMCT_3143 | Membrane-associated serine protease. | Transporter. | 0.417 |
| RMCT_3142 | DegP | RMCT_3142 | RMCT_2836 | Putative uncharacterized protein. | Trypsin-like serine protease with C-terminal PDZ domain. | 0.562 |
| RMCT_3142 | DegQ | RMCT_3142 | RMCT_1580 | Putative uncharacterized protein. | Trypsin-like serine protease with C-terminal PDZ domain. | 0.633 |
| RMCT_3142 | HhoB_1 | RMCT_3142 | RMCT_1683 | Putative uncharacterized protein. | Peptidase S1 and S6, chymotrypsin/Hap. | 0.562 |
| RMCT_3142 | HhoB_2 | RMCT_3142 | RMCT_0045 | Putative uncharacterized protein. | Trypsin-like serine protease with C-terminal PDZ domain. | 0.562 |
page 1 of 2