STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_3155Integral membrane protein. (584 aa)    
Predicted Functional Partners:
RMCT_3153
Antibiotic ABC transporter membrane protein.
 
  
 0.927
DrrA_2
ABC transporter ATP-binding protein.
  
 
 0.839
CtaA
Antibiotic ABC transporter membrane protein.
 
   
 0.821
RMCT_4577
Lipoprotein lpqW.
 
   
 0.820
RMCT_4662
Transmembrane protein.
 
  
 0.809
RMCT_3156
Transcriptional regulator.
 
     0.798
SufD
FeS assembly protein SufD.
     
 0.783
SufS
Cysteine desulfurase csd; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
     
 0.783
YurY
FeS assembly ATPase SufC.
     
 0.782
RMCT_3157
FeS assembly protein SufB.
     
 0.771
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.