STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ClcD_2Putative carboxymethylenebutenolidase. (412 aa)    
Predicted Functional Partners:
ClcD_1
Alanine rich hydrolase.
  
  
 
0.913
AndAd
Aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
    0.790
AndAc
Rieske (2Fe-2S) domain-containing protein.
 
    0.760
RMCT_4221
Putative uncharacterized protein.
  
  
 0.723
NdoA
Anthranilate dioxygenase ferredoxin.
 
    0.672
BedA
NAD(FAD)-dependent dehydrogenase.
  
    0.526
RMCT_3180
Putative uncharacterized protein.
  
    0.457
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
    0.440
PpsA_2
Beta-ketoacyl synthase.
 
 
 0.410
FabG_13
Short chain dehydrogenase.
 
   0.404
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.