Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
PtpB_1Protein tyrosine/serine phosphatase. (257 aa)    
Predicted Functional Partners:
PpsA_1
Phosphoenolpyruvate synthase.
       0.782
RMCT_3208
Putative uncharacterized protein.
       0.773
FabG_7
3-oxoacyl-[acyl-carrier-protein] reductase.
   
   0.580
NuoM
NADH dehydrogenase subunit M.
   
 
 0.535
YchM
Sulfate permease.
   
 
 0.501
TrsA_1
Putative acyl-CoA synthetase.
       0.409
RMCT_0418
Cutinase.
   
 
 0.402
RMCT_0530
Cutinase cut2; Catalyzes the hydrolysis of cutin, a polyester that forms the structure of plant cuticle.
   
 
 0.402
RMCT_1417
Cutinase; Catalyzes the hydrolysis of cutin, a polyester that forms the structure of plant cuticle.
   
 
 0.402
Cut1
Cutinase.
   
 
 0.402
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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