Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RMCT_3219Short-chain dehydrogenase/reductase SDR. (76 aa)    
Predicted Functional Partners:
AldA_4
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.821
RMCT_0425
Mycofactocin system RPExFGAL protein.
 
   
 0.766
MoaA_1
Radical SAM peptide maturase, mycofactocin system.
 
  
 0.716
RMCT_1653
Carveol dehydrogenase.
  
     0.709
KasA_2
Fatty acid synthase.
  
 0.707
RMCT_2249
Carveol dehydrogenase.
  
     0.649
RMCT_0429
Mycofactocin system glycosyltransferase.
 
 
 
 0.644
RMCT_3427
Amidohydrolase.
 
    0.634
RMCT_2392
Putative uncharacterized protein.
 
 0.621
RMCT_1610
Putative uncharacterized protein.
 
 0.604
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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