Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RMCT_3230Putative uncharacterized protein. (142 aa)    
Predicted Functional Partners:
PcaF_2
Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.904
RMCT_3407
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.858
RMCT_4189
Lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.857
RMCT_0894
propanoyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.856
RMCT_4642
Lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.850
RMCT_0957
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.839
RMCT_3225
DitF protein.
 
 
 0.834
RMCT_3228
Putative uncharacterized protein.
  
   0.719
RMCT_4460
Lipid-transfer protein.
 
 
 0.707
RMCT_4629
Thiolase.
 
 
 0.672
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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