STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XerD_6Putative uncharacterized protein. (311 aa)    
Predicted Functional Partners:
XerD_2
Phage integrase family protein.
 
     0.779
NudF_1
NTP pyrophosphohydrolase.
  
  
 0.778
RMCT_3290
Putative uncharacterized protein.
       0.776
SpoIIIE
Cell division transmembrane protein ftsK.
 
   
 0.716
pyrG
CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
  
  
 0.638
RMCT_3289
Putative uncharacterized protein.
       0.574
ParB
Chromosome partitioning protein parB; Belongs to the ParB family.
 
  
 0.531
Soj_3
Chromosome partitioning protein parA.
 
   
 0.511
RMCT_3292
Carboxymuconolactone decarboxylase.
     
 0.497
RMCT_4559
Stage II sporulation protein E.
  
  
 0.491
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.