STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_3294Uncharacterized protein. (173 aa)    
Predicted Functional Partners:
EspA_2
Putative uncharacterized protein.
       0.773
RMCT_3296
Transmembrane protein.
     
 0.611
RMCT_3298
Integral membrane protein.
  
  
 0.599
GalE_4
UDP-glucose 4-epimerase.
       0.561
RMCT_4559
Stage II sporulation protein E.
  
  
 0.555
RMCT_3292
Carboxymuconolactone decarboxylase.
  
  
 0.498
IrtB
Drug ABC transporter ATP-binding protein.
  
  
 0.488
recA
Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
  
 0.472
ArtM_2
ABC transporter ATP-binding protein.
  
  
 0.469
FtsE_2
Transmembrane ATP-binding protein ABC transporter.
  
  
 0.469
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.