STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_3296Transmembrane protein. (584 aa)    
Predicted Functional Partners:
RMCT_3298
Integral membrane protein.
 
   
 0.780
RMCT_4136
Protein of unknown function.
 
     0.753
GalE_4
UDP-glucose 4-epimerase.
     
 0.740
RMCT_0183
Putative uncharacterized protein.
  
     0.726
RMCT_4667
Cutinase.
  
   
 0.719
RMCT_3585
Pyrrolo-quinoline quinone.
 
   
 0.718
RMCT_0667
Integral membrane protein.
  
     0.714
RMCT_4137
Transmembrane protein.
 
     0.714
RMCT_0185
Phage T7 F exclusion suppressor FxsA.
 
    0.708
lpqB
Lipoprotein LpqB.
 
     0.703
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.