STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GutB_2Alcohol dehydrogenase. (337 aa)    
Predicted Functional Partners:
LimB_7
Limonene 1,2-monooxygenase.
 
   
 0.865
EphA
Epoxide hydrolase ephA.
 
  
 0.845
IdnD
Theronine dehydrogenase-like Zn-dependent dehydrogenase.
  
     0.725
LpqG
Lipoprotein lpqG.
       0.689
Tdh
Alcohol dehydrogenase.
  
     0.685
ftsH
Cell division protein ftsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
     
 0.671
Adh_2
Alcohol dehydrogenase adhA.
 
 
 0.643
SulD
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase.
       0.615
RMCT_3314
Protein of unknown function.
       0.612
FrmA
adhD.
 
  
 0.592
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.