Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EphAEpoxide hydrolase ephA. (313 aa)    
Predicted Functional Partners:
LimB_7
Limonene 1,2-monooxygenase.
  
  
 0.848
GutB_2
Alcohol dehydrogenase.
 
   
 0.831
LpqG
Lipoprotein lpqG.
       0.697
EthA_1
Flavin-binding monooxygenase.
 
 
 0.653
EthA_3
Monooxygenase EthA.
  
 
 0.592
PpsA_2
Beta-ketoacyl synthase.
  
 0.587
Pks2
Polyketide synthase pks5.
  
 0.580
RMCT_2088
Hypothetical protein.
  
 
 0.548
ftsH
Cell division protein ftsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
  
  
 0.544
RMCT_1947
Dehydrogenase.
 
 
 0.530
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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