Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EphA | EthA_1 | RMCT_3308 | RMCT_3966 | Epoxide hydrolase ephA. | Flavin-binding monooxygenase. | 0.767 |
EphA | EthA_3 | RMCT_3308 | RMCT_3472 | Epoxide hydrolase ephA. | Monooxygenase EthA. | 0.726 |
EphA | GutB_2 | RMCT_3308 | RMCT_3306 | Epoxide hydrolase ephA. | Alcohol dehydrogenase. | 0.845 |
EphA | LimB_7 | RMCT_3308 | RMCT_3307 | Epoxide hydrolase ephA. | Limonene 1,2-monooxygenase. | 0.855 |
EphA | LpqG | RMCT_3308 | RMCT_3305 | Epoxide hydrolase ephA. | Lipoprotein lpqG. | 0.707 |
EphA | RMCT_0462 | RMCT_3308 | RMCT_0462 | Epoxide hydrolase ephA. | Putative uncharacterized protein. | 0.579 |
EphA | RMCT_0584 | RMCT_3308 | RMCT_0584 | Epoxide hydrolase ephA. | Conserved Mce associated membrane protein. | 0.579 |
EphA | RMCT_0585 | RMCT_3308 | RMCT_0585 | Epoxide hydrolase ephA. | Mce associated membrane protein. | 0.579 |
EphA | RMCT_0949 | RMCT_3308 | RMCT_0949 | Epoxide hydrolase ephA. | Twin-arginine translocation pathway signal. | 0.579 |
EphA | RMCT_0950 | RMCT_3308 | RMCT_0950 | Epoxide hydrolase ephA. | Putative uncharacterized protein. | 0.579 |
EthA_1 | EphA | RMCT_3966 | RMCT_3308 | Flavin-binding monooxygenase. | Epoxide hydrolase ephA. | 0.767 |
EthA_3 | EphA | RMCT_3472 | RMCT_3308 | Monooxygenase EthA. | Epoxide hydrolase ephA. | 0.726 |
GutB_2 | EphA | RMCT_3306 | RMCT_3308 | Alcohol dehydrogenase. | Epoxide hydrolase ephA. | 0.845 |
GutB_2 | LimB_7 | RMCT_3306 | RMCT_3307 | Alcohol dehydrogenase. | Limonene 1,2-monooxygenase. | 0.865 |
GutB_2 | LpqG | RMCT_3306 | RMCT_3305 | Alcohol dehydrogenase. | Lipoprotein lpqG. | 0.689 |
LimB_7 | EphA | RMCT_3307 | RMCT_3308 | Limonene 1,2-monooxygenase. | Epoxide hydrolase ephA. | 0.855 |
LimB_7 | GutB_2 | RMCT_3307 | RMCT_3306 | Limonene 1,2-monooxygenase. | Alcohol dehydrogenase. | 0.865 |
LimB_7 | LpqG | RMCT_3307 | RMCT_3305 | Limonene 1,2-monooxygenase. | Lipoprotein lpqG. | 0.689 |
LpqG | EphA | RMCT_3305 | RMCT_3308 | Lipoprotein lpqG. | Epoxide hydrolase ephA. | 0.707 |
LpqG | GutB_2 | RMCT_3305 | RMCT_3306 | Lipoprotein lpqG. | Alcohol dehydrogenase. | 0.689 |
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