STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_3327Lipoprotein lpqF. (457 aa)    
Predicted Functional Partners:
IsdG
Antibiotic biosynthesis monooxygenase.
     
 0.948
InfC
Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.
     
 0.830
RMCT_3586
Immunogenic protein MPB64/MPT64.
 
     0.727
RMCT_0740
Alanine rich transmembrane protein.
  
     0.723
RMCT_4047
Putative uncharacterized protein.
 
     0.710
RMCT_2644
Putative uncharacterized protein.
  
     0.707
RMCT_0063
Hypothetical protein.
  
     0.701
RMCT_2344
MmpS3 protein.
  
    0.699
Snm
Transmembrane protein.
  
     0.699
RMCT_1816
Hypothetical protein.
  
     0.692
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.