Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PbuEMajor facilitator superfamily transporter. (423 aa)    
Predicted Functional Partners:
Pgm
Phosphoglucomutase.
     
 0.875
RMCT_2529
Rifampin ADP-ribosyl transferase.
  
    0.751
crcB-2
Putative fluoride ion transporter CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
     
 0.645
RMCT_3155
Integral membrane protein.
 
 
 
 0.606
crcB
Putative fluoride ion transporter CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
     
 0.604
MbtL
Acyl carrier protein.
     
 0.491
MbtM
long-chain-fatty-acid--CoA ligase.
     
 0.490
BigR_3
ArsR family transcriptional regulator.
  
  
 0.486
RMCT_2268
Putative uncharacterized protein.
 
   
 0.486
ArsR
ArsR family transcriptional regulator.
  
  
 0.486
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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