Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CoaA_1Phosphoribulokinase/uridine kinase. (224 aa)    
Predicted Functional Partners:
RMCT_3368
Aldo/keto reductase, diketogulonate reductase.
       0.773
RMCT_2446
Sugar ABC transporter periplasmic protein.
 
     0.490
RMCT_3367
Protein of unknown function.
       0.490
Por
Mannitol 2-dehydrogenase.
 
   
 0.465
IolC
Sugar kinase, ribokinase.
 
   
 0.451
coaE
dephospho-CoA kinase coaE; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
     
 0.425
RMCT_2640
Lipoprotein lprQ.
      
 0.402
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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