Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_3377Putative uncharacterized protein. (250 aa)    
Predicted Functional Partners:
Gmr
GAF sensor-containing diguanylate cyclase/phosphodiesterase.
  
  
 0.935
RMCT_3376
Putative uncharacterized protein.
       0.754
TetR_2
TetR family transcriptional regulator.
  
  
 0.749
AdrA
Diguanylate cyclase.
  
  
 0.599
TetR_3
TetR family transcriptional regulator.
  
  
 0.565
YeaP
Diguanylate cyclase.
  
  
 0.560
RMCT_0449
Transcriptional regulator.
  
  
 0.508
Cya_1
Adenylate cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
  
  
 0.483
VraR
Two-component system, regulatory protein.
  
  
 0.475
MoeZ
Molybdopterin biosynthesis-like protein MoeZ.
  
  
 0.428
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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