STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_3381Carveol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (273 aa)    
Predicted Functional Partners:
RMCT_3382
acyl-CoA dehydrogenase.
 
 0.948
KasA_2
Fatty acid synthase.
  
 0.782
RMCT_3385
acyl-CoA dehydrogenase.
  
 0.766
FabG_26
Dehydrogenase.
  
     0.708
FabG_11
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein.
  
     0.707
ThlA_1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.660
FabG_10
3-ketoacyl-(acyl-carrier-protein) reductase.
 
    
0.658
RMCT_0425
Mycofactocin system RPExFGAL protein.
 
   
 0.633
MoaA_1
Radical SAM peptide maturase, mycofactocin system.
 
   
 0.632
BbsG_8
acyl-CoA dehydrogenase.
 
 0.599
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.