STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_3385acyl-CoA dehydrogenase. (397 aa)    
Predicted Functional Partners:
ThlA_1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.933
McbR_2
GntR family transcriptional regulator.
       0.883
FabG_10
3-ketoacyl-(acyl-carrier-protein) reductase.
  
 0.858
RMCT_3381
Carveol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 0.766
FadJ
3-hydroxyacyl-CoA dehydrogenase.
  
 0.745
FixB
Electron transfer flavoprotein alpha subunit fixB.
 
 0.745
EtfB
Electron transfer flavoprotein beta subunit fixA.
 
 
 0.721
Frc_7
L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
  
 
  0.707
EchA8_24
enoyl-CoA hydratase echA9.
  
 0.703
CaiD_10
enoyl-CoA hydratase.
  
 0.703
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.