Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EchA8_10 | EchA8_9 | RMCT_3391 | RMCT_3390 | enoyl-CoA hydratase/isomerase. | enoyl-CoA hydratase/isomerase. | 0.834 |
EchA8_10 | EryA_1 | RMCT_3391 | RMCT_0775 | enoyl-CoA hydratase/isomerase. | Acyl transferase domain-containing protein. | 0.689 |
EchA8_10 | FadD_8 | RMCT_3391 | RMCT_3388 | enoyl-CoA hydratase/isomerase. | AMP-dependent synthetase and ligase. | 0.868 |
EchA8_10 | FcbB2_4 | RMCT_3391 | RMCT_3392 | enoyl-CoA hydratase/isomerase. | enoyl-CoA hydratase/isomerase. | 0.806 |
EchA8_10 | Hcl_3 | RMCT_3391 | RMCT_3387 | enoyl-CoA hydratase/isomerase. | AMP-dependent synthetase and ligase. | 0.884 |
EchA8_10 | MenE_1 | RMCT_3391 | RMCT_3389 | enoyl-CoA hydratase/isomerase. | AMP-dependent synthetase and ligase. | 0.883 |
EchA8_10 | Pks2 | RMCT_3391 | RMCT_4379 | enoyl-CoA hydratase/isomerase. | Polyketide synthase pks5. | 0.704 |
EchA8_10 | PpsA_2 | RMCT_3391 | RMCT_0416 | enoyl-CoA hydratase/isomerase. | Beta-ketoacyl synthase. | 0.725 |
EchA8_10 | PpsA_7 | RMCT_3391 | RMCT_4669 | enoyl-CoA hydratase/isomerase. | Polyketide synthase pks13. | 0.522 |
EchA8_10 | RMCT_3393 | RMCT_3391 | RMCT_3393 | enoyl-CoA hydratase/isomerase. | Putative uncharacterized protein. | 0.686 |
EchA8_9 | EchA8_10 | RMCT_3390 | RMCT_3391 | enoyl-CoA hydratase/isomerase. | enoyl-CoA hydratase/isomerase. | 0.834 |
EchA8_9 | EryA_1 | RMCT_3390 | RMCT_0775 | enoyl-CoA hydratase/isomerase. | Acyl transferase domain-containing protein. | 0.689 |
EchA8_9 | FadD_8 | RMCT_3390 | RMCT_3388 | enoyl-CoA hydratase/isomerase. | AMP-dependent synthetase and ligase. | 0.932 |
EchA8_9 | FcbB2_4 | RMCT_3390 | RMCT_3392 | enoyl-CoA hydratase/isomerase. | enoyl-CoA hydratase/isomerase. | 0.887 |
EchA8_9 | Hcl_3 | RMCT_3390 | RMCT_3387 | enoyl-CoA hydratase/isomerase. | AMP-dependent synthetase and ligase. | 0.936 |
EchA8_9 | MenE_1 | RMCT_3390 | RMCT_3389 | enoyl-CoA hydratase/isomerase. | AMP-dependent synthetase and ligase. | 0.907 |
EchA8_9 | Pks2 | RMCT_3390 | RMCT_4379 | enoyl-CoA hydratase/isomerase. | Polyketide synthase pks5. | 0.704 |
EchA8_9 | PpsA_2 | RMCT_3390 | RMCT_0416 | enoyl-CoA hydratase/isomerase. | Beta-ketoacyl synthase. | 0.725 |
EchA8_9 | PpsA_7 | RMCT_3390 | RMCT_4669 | enoyl-CoA hydratase/isomerase. | Polyketide synthase pks13. | 0.522 |
EchA8_9 | RMCT_3393 | RMCT_3390 | RMCT_3393 | enoyl-CoA hydratase/isomerase. | Putative uncharacterized protein. | 0.718 |
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