STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TetR_2TetR family transcriptional regulator. (237 aa)    
Predicted Functional Partners:
Gmr
GAF sensor-containing diguanylate cyclase/phosphodiesterase.
  
  
 0.824
RMCT_3377
Putative uncharacterized protein.
  
  
 0.736
DapA_1
Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family.
     
 0.723
RMCT_2009
Putative uncharacterized protein.
  
     0.654
RMCT_0990
Thioesterase.
 
     0.637
RMCT_0739
Membrane protein.
  
     0.618
RMCT_1150
Protein of unknown function.
  
   
 0.613
FabG_11
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein.
 
     0.592
RMCT_0018
Transcriptional regulator.
  
     0.570
RMCT_1257
Putative uncharacterized protein.
  
     0.551
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.