STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HapE_4Monooxygenase. (533 aa)    
Predicted Functional Partners:
RMCT_3414
Metal-dependent hydrolase.
 
     0.825
RMCT_3415
Putative uncharacterized protein.
       0.773
RMCT_2560
AraC family transcriptional regulator.
 
   
 0.632
RMCT_0261
Cytochrome P450.
  
 
 0.552
RMCT_2457
Cytochrome P450 135B1 cyp135B1.
  
 
 0.552
RMCT_3141
Cytochrome P450 CYP136.
  
 
 0.552
RMCT_3417
Transcriptional regulator, TetR family.
       0.551
HapE_3
Flavin-containing monooxygenase.
  
     0.546
RMCT_2820
Short-chain type dehydrogenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.493
RMCT_4354
Cobalamin biosynthesis protein cobG.
      
 0.491
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.