Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DagK | GlpD_1 | RMCT_3809 | RMCT_3445 | Diacylglycerol kinase. | Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.827 |
DagK | GlpD_2 | RMCT_3809 | RMCT_3812 | Diacylglycerol kinase. | Glycerol-3-phosphate dehydrogenase glpD1; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.931 |
DagK | PlsC_1 | RMCT_3809 | RMCT_3891 | Diacylglycerol kinase. | 1-acylglycerol-3-phosphate O-acyltransferase. | 0.911 |
DagK | gpsA | RMCT_3809 | RMCT_2534 | Diacylglycerol kinase. | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.814 |
DagK | gpsA-2 | RMCT_3809 | RMCT_3527 | Diacylglycerol kinase. | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.814 |
GlpD_1 | DagK | RMCT_3445 | RMCT_3809 | Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | Diacylglycerol kinase. | 0.827 |
GlpD_1 | GlpD_2 | RMCT_3445 | RMCT_3812 | Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | Glycerol-3-phosphate dehydrogenase glpD1; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.924 |
GlpD_1 | GlpR | RMCT_3445 | RMCT_0569 | Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | DeoR family transcriptional regulator. | 0.757 |
GlpD_1 | LpdA | RMCT_3445 | RMCT_3444 | Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | Flavoprotein disulfide reductase. | 0.895 |
GlpD_1 | PlsB | RMCT_3445 | RMCT_0911 | Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family. | 0.929 |
GlpD_1 | PlsC_1 | RMCT_3445 | RMCT_3891 | Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | 1-acylglycerol-3-phosphate O-acyltransferase. | 0.830 |
GlpD_1 | RluA | RMCT_3445 | RMCT_3446 | Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | Pseudouridine synthase. | 0.897 |
GlpD_1 | glpK | RMCT_3445 | RMCT_0079 | Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | Glycerol kinase GlpK; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.998 |
GlpD_1 | gpsA | RMCT_3445 | RMCT_2534 | Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.933 |
GlpD_1 | gpsA-2 | RMCT_3445 | RMCT_3527 | Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.943 |
GlpD_2 | DagK | RMCT_3812 | RMCT_3809 | Glycerol-3-phosphate dehydrogenase glpD1; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | Diacylglycerol kinase. | 0.931 |
GlpD_2 | GlpD_1 | RMCT_3812 | RMCT_3445 | Glycerol-3-phosphate dehydrogenase glpD1; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.924 |
GlpD_2 | GlpR | RMCT_3812 | RMCT_0569 | Glycerol-3-phosphate dehydrogenase glpD1; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | DeoR family transcriptional regulator. | 0.774 |
GlpD_2 | LpdA | RMCT_3812 | RMCT_3444 | Glycerol-3-phosphate dehydrogenase glpD1; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | Flavoprotein disulfide reductase. | 0.458 |
GlpD_2 | PlsB | RMCT_3812 | RMCT_0911 | Glycerol-3-phosphate dehydrogenase glpD1; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family. | 0.914 |
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