STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ActIIIShort-chain alcohol dehydrogenase. (270 aa)    
Predicted Functional Partners:
YcdF_2
Dehydrogenase.
 
    0.709
FabG_7
3-oxoacyl-[acyl-carrier-protein] reductase.
 
    0.708
CpnA_1
Short-chain dehydrogenase/reductase SDR.
 
    0.700
FabG_24
Short-chain dehydrogenase/reductase SDR.
 
    0.674
FabG_33
Short-chain dehydrogenase/reductase SDR.
 
    0.626
RMCT_3456
ATP-dependent helicase.
       0.621
FabG_15
Oxidoreductase.
 
    0.593
RMCT_4317
Flavodoxin-like protein.
  
  
 0.571
HdhA_2
Short chain dehydrogenase.
 
    0.552
RMCT_3458
Putative uncharacterized protein.
       0.549
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.