Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RtcBPutative uncharacterized protein. (393 aa)    
Predicted Functional Partners:
RhlE_1
ATP-dependent RNA helicase.
   
 0.676
deaD
Cold-shock deaD-box protein A deaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.
   
 0.676
RhlE_2
ATP-dependent RNA helicase rhlE; Belongs to the DEAD box helicase family.
   
 0.676
RMCT_0225
Putative uncharacterized protein.
  
  
 0.672
RMCT_3466
Transferase.
       0.526
RMCT_3777
Hypothetical protein.
  
  
 0.492
RMCT_2302
Secretory lipase.
 
  
 0.468
PpsA_2
Beta-ketoacyl synthase.
 
   0.464
FccB
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
  
 
 0.464
BedA
NAD(FAD)-dependent dehydrogenase.
  
 
 0.464
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.