STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EthA_3Monooxygenase EthA. (493 aa)    
Predicted Functional Partners:
EthR_7
TetR family transcriptional regulator.
 
   
 0.863
EphA
Epoxide hydrolase ephA.
  
 
 0.726
DesA3
linoleoyl-CoA desaturase.
 
   
 0.721
PamO_2
Monooxygenase.
 
     0.699
RMCT_2820
Short-chain type dehydrogenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.695
RMCT_0602
Dehydrogenase.
   
  
 0.643
RMCT_0603
Dehydrogenase.
   
  
 0.643
RMCT_1947
Dehydrogenase.
   
  
 0.643
FadJ
3-hydroxyacyl-CoA dehydrogenase.
 
 
 
 0.624
Tgs2_3
Putative diacylglycerol O-acyltransferase; Belongs to the long-chain O-acyltransferase family.
 
 
 0.580
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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