STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_3477Copper resistance D domain-containing protein. (307 aa)    
Predicted Functional Partners:
YcnJ
Copper resistance protein CopC.
 
  
 0.902
RMCT_3480
Hypothetical protein.
 
     0.723
RMCT_3479
Putative uncharacterized protein.
       0.709
RMCT_2268
Putative uncharacterized protein.
  
    0.642
RMCT_2919
Putative uncharacterized protein.
  
     0.630
rpmH
50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.
      
 0.616
RMCT_2452
Ser/Thr protein phosphatase.
  
     0.590
RMCT_3780
Isochorismatase hydrolase.
 
     0.551
RMCT_3476
Uncharacterized protein.
       0.550
RsmC
Methyltransferase small; Belongs to the methyltransferase superfamily.
 
     0.543
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.